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Section 4.
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Non-covalent bonds.
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Hydrogen bonds.
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Not hydrogen bombs, but hydrogen bonds.
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Much more peaceful things.
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Hydrogen bonds.
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We've agreed that oxygen is greedy compared to a hydrogen.
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And so if I have a water molecule,
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I have some negative charge over there, a little bit
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of positive charge over there.
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Suppose I have another water molecule over here.
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I have a little bit of negative charge over there,
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and I've got a little bit a positive charge over there.
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Not that much, but I got some.
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This is like a little magnet, got a positive end
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and a negative end.
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This thing's here a little bit like a magnet, positive end
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and a negative end.
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What happens when I have two magnets?
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They attract, or repel.
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And so what's going to happen is these guys
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are going to attract.
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Now that doesn't sound very impressive,
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just these two little atoms-- these two little molecules.
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But I got more of that over here.
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I got more of this over here.
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And when I have a big cup of water, all of those molecules
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are doing that to each other.
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They're all weakly interacting by those little magnets,
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hydrogen bonds.
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So in fact, what I end up with are big cages like that.
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The water's all coupled to each other by these weak forces.
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And these aren't like huge forces.
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These bonds as compared to my 80 kilocalories per mole,
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these are five kilocalories per mole, just five
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kilocalories per mole.
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And it turns out that, nonetheless,
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because I have so many of them, water
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is highly, highly structured.
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They're all coupled to each other,
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moving around some, structure.
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This is so strong bugs can walk on water.
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Bugs are walking on hydrogen bonds.
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The net the bugs are walking on, that surface
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is provided by the strength of all those hydrogen bonds.
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No hydrogen bonds, the bugs sink.
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You can tell that.
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You put in something disrupts the hydrogen bond, soap.
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They sink.
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So you may not be impressed by hydrogen bonds, any one
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hydrogen bond, but aggregate hydrogen bonds are pretty cool.
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Next time you think of water, think of water as a highly,
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highly structured business.
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All right.
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Strength in numbers.
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Next we have ionic bonds.
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Sometimes, sometimes we have the situation
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where a hydrogen may come off here, and move over
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here to create a net positive charge here
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and a net negative charge there.
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So here this is no longer the sharing
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of electrons, but really the exit of an electron--
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the exit of a positive charge to create a negative charge in one
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place and a positive charge in the other place.
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This is an ionic bond between charged ions
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here, between ions.
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So these depend, of course, on their distances
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as any of these forces depend, ionic, of these magnetic forces
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depend with distance.
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They're also, on the whole, relatively weakish.
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But you add them up together, and these all have effects.
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Hydrogen bonds have effects.
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Ionic bonds have effects.
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Another kind of bond, even weirder.
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Van Der Waals forces.
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Van Der Waals bonds.
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I told you that carbon carbon, nonpolar.
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Carbon hydrogen, nonpolar.
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Equal sharing.
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That's all very nonpolar.
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Well, I'm slightly lying.
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It turns out that even though there's
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an equal sharing on average, at any given instant
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the negative charge might be a little on one side
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or a little on the other side.
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It sort of fluctuates back and forth.
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But if these guys are right near each other,
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and it so happens that this instant, this is
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a little more negative and this is a little more positive,
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just temporarily, what is that negative going to do over here
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to the negative charges?
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Push them away.
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It's going to repel those negative charges.
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And they'll go over here a little bit.
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And this will become a little more positive.
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But of course that's only instantaneous,
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because it's a fluctuating back and forth.
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When it's more positive on that side,
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it's going to be pulling negative charges over.
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So both bonds are fluctuating, but they can fluctuate
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in concert with each other.
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They entrain each other.
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And if you have those two bonds that are fluctuating,
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and they can manage to entrain each other,
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then it's as if you have little magnets temporarily going back
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and forth and back and forth.
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And that works, too.
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Now this is even less impressive than hydrogen bonds.
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This gets you an absolutely ridiculously puny one
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kilocalorie per mole.
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Not very impressive, is it?
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But if I have some big molecule, like a protein,
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the sum of all these forces-- the sum
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of hydrogen bonds and ionic bonds
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and these Van Der Waals interactions--
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add up to big, big numbers.
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Big numbers.
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And in fact, biological molecules
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are held together, yes, by their covalent bonds.
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They matter a lot.
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But the shape they take up depends much less
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on their covalent bonds than all of
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these non-covalent interactions that are taking place.
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The hydrogen bonds, the ionic ponds, the Van Der Waals
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interactions, to determine whether some long molecule
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folds up this way or folds up that way or whatever.
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Now just to make you appreciate how powerful those forces are,
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I bring you the gecko.
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The gecko can climb up glass.
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It can climb this way.
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Why is the gecko not falling down?
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Well people thought maybe the gecko has glue on its pads.
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It does not.
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What holds the gecko up?
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The gecko is held up by Van Der Waals forces.
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It manages to have its palm have these little flappy pads, that
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can make so much contact that it's
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making lots of these ridiculously tiny Van Der Waals
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interactions with the surface.
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And that is enough to hold up a gecko.
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Do not try this yourself, as it turns out
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that you lack the right kind of pads and, I'm sorry to say,
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are too heavy to be held up.
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But for something the size of a gecko,
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it can be held up by Van Der Waals interactions.
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Strength in numbers.
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We have to understand that to understand biology.
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You're almost done.
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But before we go on we've got a couple questions for you
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about different kinds of bonds.
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